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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">Fabio,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">&nbsp; How else is it going to find it your executable?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">&nbsp; It is very common to use a common filesystem, such as NFS or Lustre .<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">You can copy the executable, but yu alsos need all data, etc.<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">&nbsp;&nbsp; I’d also put
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">cd $PBS_O_WORKDIR<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">in the script before runrun, and probably also use<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D">./runrun&nbsp; in case ./ is not in your path.<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1F497D">James Coyle, PhD<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1F497D">High Performance Computing Group&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1F497D">&nbsp;Iowa State Univ.&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1F497D">web:
<a href="http://www.public.iastate.edu/~jjc"><span style="color:blue">http://jjc.public.iastate.edu/</span></a><o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D"><o:p>&nbsp;</o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1F497D"><o:p>&nbsp;</o:p></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:&quot;Tahoma&quot;,&quot;sans-serif&quot;">From:</span></b><span style="font-size:10.0pt;font-family:&quot;Tahoma&quot;,&quot;sans-serif&quot;"> torqueusers-bounces@supercluster.org [mailto:torqueusers-bounces@supercluster.org]
<b>On Behalf Of </b>Fabio Andrijauskas<br>
<b>Sent:</b> Thursday, January 24, 2013 6:46 AM<br>
<b>To:</b> torqueusers@supercluster.org<br>
<b>Subject:</b> [torqueusers] Job can't find the execubtale<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p>&nbsp;</o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">Hi all,<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">I am trying to submit a job to my new cluster with the script:<br>
<br>
#!/bin/bash<br>
#PBS -l walltime=00:5:00<br>
#PBS -l nice=19<br>
#PBS -q linux-spool<br>
#PBS -e 2.err<br>
#PBS -o 1.out<br>
&nbsp;<br>
runrun<o:p></o:p></p>
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<p class="MsoNormal">the 2.err: /var/spool/torque/mom_priv/<o:p></o:p></p>
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<p class="MsoNormal">jobs/<a href="http://77.server.SC" target="_blank">77.server.SC</a>: line 8: runrun: command not found<o:p></o:p></p>
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<p class="MsoNormal"><o:p>&nbsp;</o:p></p>
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<p class="MsoNormal">But, to be successful in the process is necessary to copy the software (runrun) to the nodes manually . Is mandatory to use NFS with torque ?<o:p></o:p></p>
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<br>
-- <br>
Fabio Andrijauskas<br>
<a href="http://www.marvinproject.org/" target="_blank">http://www.marvinproject.org</a><o:p></o:p></p>
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<p class="MsoNormal"><a href="http://fabio.andrijauskas.com.br/" target="_blank">http://fabio.andrijauskas.com.br/</a><o:p></o:p></p>
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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:&quot;Arial&quot;,&quot;sans-serif&quot;">Céus limpos......</span><o:p></o:p></p>
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