<div dir="ltr">Thank you very much</div><div class="gmail_extra"><br><br><div class="gmail_quote">2013/1/24 Coyle, James J [ITACD] <span dir="ltr">&lt;<a href="mailto:jjc@iastate.edu" target="_blank">jjc@iastate.edu</a>&gt;</span><br>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">Fabio,<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">  How else is it going to find it your executable?<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">  It is very common to use a common filesystem, such as NFS or Lustre .<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">You can copy the executable, but yu alsos need all data, etc.<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">   I’d also put
<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">cd $PBS_O_WORKDIR<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">in the script before runrun, and probably also use<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:&quot;Calibri&quot;,&quot;sans-serif&quot;;color:#1f497d">./runrun  in case ./ is not in your path.<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1f497d">James Coyle, PhD<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1f497d">High Performance Computing Group       
<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1f497d"> Iowa State Univ.         
<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:16.0pt;font-family:Consolas;color:#1f497d">web:
<a href="http://www.public.iastate.edu/~jjc" target="_blank"><span style="color:blue">http://jjc.public.iastate.edu/</span></a><u></u><u></u></span></p>
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<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:&quot;Tahoma&quot;,&quot;sans-serif&quot;">From:</span></b><span style="font-size:10.0pt;font-family:&quot;Tahoma&quot;,&quot;sans-serif&quot;"> <a href="mailto:torqueusers-bounces@supercluster.org" target="_blank">torqueusers-bounces@supercluster.org</a> [mailto:<a href="mailto:torqueusers-bounces@supercluster.org" target="_blank">torqueusers-bounces@supercluster.org</a>]
<b>On Behalf Of </b>Fabio Andrijauskas<br>
<b>Sent:</b> Thursday, January 24, 2013 6:46 AM<br>
<b>To:</b> <a href="mailto:torqueusers@supercluster.org" target="_blank">torqueusers@supercluster.org</a><br>
<b>Subject:</b> [torqueusers] Job can&#39;t find the execubtale<u></u><u></u></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">Hi all,<u></u><u></u></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt">I am trying to submit a job to my new cluster with the script:<br>
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#!/bin/bash<br>
#PBS -l walltime=00:5:00<br>
#PBS -l nice=19<br>
#PBS -q linux-spool<br>
#PBS -e 2.err<br>
#PBS -o 1.out<br>
 <br>
runrun<u></u><u></u></p>
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<p class="MsoNormal">the 2.err: /var/spool/torque/mom_priv/<u></u><u></u></p>
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<p class="MsoNormal">jobs/<a href="http://77.server.SC" target="_blank">77.server.SC</a>: line 8: runrun: command not found<u></u><u></u></p>
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<p class="MsoNormal">But, to be successful in the process is necessary to copy the software (runrun) to the nodes manually . Is mandatory to use NFS with torque ?<u></u><u></u></p>
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-- <br>
Fabio Andrijauskas<br>
<a href="http://www.marvinproject.org/" target="_blank">http://www.marvinproject.org</a><u></u><u></u></p>
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<p class="MsoNormal"><a href="http://fabio.andrijauskas.com.br/" target="_blank">http://fabio.andrijauskas.com.br/</a><u></u><u></u></p>
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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:&quot;Arial&quot;,&quot;sans-serif&quot;">Céus limpos......</span><u></u><u></u></p>
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<br></blockquote></div><br><br clear="all"><br>-- <br>Fabio Andrijauskas<br><a href="http://www.marvinproject.org/" target="_blank">http://www.marvinproject.org</a><div><a href="http://fabio.andrijauskas.com.br/" target="_blank">http://fabio.andrijauskas.com.br/</a></div>
<div><span style="border-collapse:collapse;font-family:arial,sans-serif;font-size:13px">Céus limpos......</span></div>
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