<div class="gmail_quote">Hi guys i'm in trouble. I'm new to TORQUE and i hope you can help me. I made my first script (you can see it below). <br><br>test1.sh:<br>#!/bin/sh<br>#This is an example script test1.sh<br>
#<br>#These commands set up the Grid Environment for your job:<br>
#PBS -N test1<br>#PBS -l nodes=3<br>#PBS -q pipeline<br><br>cd /data/results/Solid0065/Trocar/DEN2348/primary/filtering_errors/prueba_bash<br>nohup SOLiD_preprocess_filter_v1.pl -i f -f DEN2348_saet_F3.csfasta -g DEN2348_saet_F3_QV.qual -x n -y y -e 15 -d 10 -n n -a y -o filtering_e15 -v on &<br>
<br><br>After i try to run it like this:<br><br>qsub -l nodes=4:ppn=2 test1.sh<br><br>But my job gets deferred all the time if i check the status with checkjob:<br>Result of checkjob 22503:<br><br><br>checking job 22503<br>
<br>State: Idle EState: Deferred<br>Creds: user:corona group:users class:pipeline qos:DEFAULT<br>WallTime: 00:00:00 of 99:23:59:59<br>SubmitTime: Thu Nov 4 18:16:27<br> (Time Queued Total: 00:22:38 Eligible: 00:00:01)<br>
<br>StartDate: -00:22:36 Thu Nov 4 18:16:29<br>Total Tasks: 8<br><br>Req[0] TaskCount: 8 Partition: ALL<br>Network: [NONE] Memory >= 0 Disk >= 0 Swap >= 0<br>Opsys: [NONE] Arch: [NONE] Features: [NONE]<br>
<br><br>IWD: [NONE] Executable: [NONE]<br>Bypass: 0 StartCount: 1<br>PartitionMask: [ALL]<br>Flags: RESTARTABLE<br><br>job is deferred. Reason: RMFailure (cannot start job - RM failure, rc: 15041, msg: 'Execution server rejected request MSG=cannot send job to mom, state=PRERUN')<br>
Holds: Defer (hold reason: RMFailure)<br>PE: 8.00 StartPriority: 1<br>cannot select job 22503 for partition DEFAULT (job hold active)<br><br>I get this error message. I've been checking a bit the mailing list and i know it's a common error but i really have no clue how to solve it. If you guys need more info for trying to find out a solution please tell me what you need.<br>
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